EnhancerDB
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  3. rs540296226[chr2:201579949]
Enhancers that have rs540296226[chr2:201579949]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 201575704 201580815 enh6102
Bone Marrow (K562) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Blood (T-cell) Astrocyte Bone (Osteoblast) Peripheral Blood (MM.1S) Blood (Karpas-422) Muscle (Myoblast) Uterus Thymus Epithelial (MCF-7)
Transcript factors that have rs540296226[chr2:201579949]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 201579943 201579953 HOXA13 JASPAR yes 80120832
chr2 201579943 201579953 HOXB13 JASPAR yes 80120833
chr2 201579943 201579953 HOXD13 JASPAR yes 80120834
chr2 201579943 201579954 HOXA10 JASPAR yes 80120835
chr2 201579943 201579954 HOXD12 JASPAR yes 80120836
chr2 201579944 201579953 CDX1 JASPAR yes 80120837
chr2 201579944 201579955 CDX2 JASPAR yes 80120838
Genes associated with rs540296226[chr2:201579949], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More