EnhancerDB
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  3. rs540305344[chr1:165804590]
Enhancers that have rs540305344[chr1:165804590]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 165800587 165834795 enh699
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Bone (Osteoblast) Lung (A549) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs540305344[chr1:165804590]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 165804577 165804592 MEF2A JASPAR yes 32801066
chr1 165804578 165804593 MEF2C JASPAR yes 32801067
chr1 165804579 165804591 MEF2A JASPAR yes 32801068
chr1 165804579 165804591 MEF2D JASPAR yes 32801069
chr1 165804584 165804599 MEF2A JASPAR yes 32801071
chr1 165804585 165804597 MEF2A JASPAR yes 32801072
chr1 165804585 165804597 MEF2D JASPAR yes 32801073
chr1 165804586 165804596 MEF2A JASPAR yes 32801074
Genes associated with rs540305344[chr1:165804590], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More