EnhancerDB
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  3. rs540329320[chr1:205515884]
Enhancers that have rs540329320[chr1:205515884]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 205502445 205516735 enh12593
Prostate (PC-3) Cervix (HeLa-S3) Epithelial (MCF-7) Large Intestine Prostate (RWPE1) Astrocyte Lung Stomach Placenta Lung (PC-9) Pancreas Heart
Transcript factors that have rs540329320[chr1:205515884]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 205515248 205516448 ZNF143 GTRD no Epithelial (MCF-7) 21372102
chr1 205515456 205516744 ZNF143 GTRD no Epithelial (MCF-7) 21372103
chr1 205515521 205515916 ZNF143 GTRD no Epithelial (MCF-7) 21372104
chr1 205515529 205518265 ZNF143 GTRD no Epithelial (MCF-7) 21372105
chr1 205515566 205516421 ZNF143 GTRD no Epithelial (MCF-7) 21372106
chr1 205515592 205516740 ZNF143 GTRD no Epithelial (MCF-7) 21372107
chr1 205515604 205517467 ZNF143 GTRD no Epithelial (MCF-7) 21372108
chr1 205515627 205516509 ZNF143 GTRD no Epithelial (MCF-7) 21372109
chr1 205515639 205517358 ZNF143 GTRD no Epithelial (MCF-7) 21372110
chr1 205515642 205516429 ZNF143 GTRD no Epithelial (MCF-7) 21372111
chr1 205515653 205516677 ZNF143 GTRD no Epithelial (MCF-7) 21372112
chr1 205515689 205516639 ZNF143 GTRD no Epithelial (MCF-7) 21372113
chr1 205515703 205516432 ZNF143 GTRD no Epithelial (MCF-7) 21372114
chr1 205515704 205516584 ZNF143 GTRD no Epithelial (MCF-7) 21372115
chr1 205515780 205516432 ZNF143 GTRD no Epithelial (MCF-7) 21372116
chr1 205515830 205516279 ZNF143 GTRD no Epithelial (MCF-7) 21372117
chr1 205515872 205515885 ZBTB18 JASPAR yes 34769771
chr1 205515874 205515884 NEUROG2 JASPAR yes 34769772
Genes associated with rs540329320[chr1:205515884], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More