EnhancerDB
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  3. rs540339538[chr1:226495349]
Enhancers that have rs540339538[chr1:226495349]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 226487048 226495615 enh962
Blood (OCI-LY7) Neural Stem Cells (H9) Blood (Karpas-422) Heart
Transcript factors that have rs540339538[chr1:226495349]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 226495334 226495349 FOXA1 JASPAR yes 35806935
chr1 226495337 226495351 ONECUT2 JASPAR yes 35806940
chr1 226495337 226495351 ONECUT3 JASPAR yes 35806941
chr1 226495337 226495352 FOXP1 JASPAR yes 35806942
chr1 226495337 226495352 HNF1A JASPAR yes 35806943
chr1 226495338 226495352 POU4F1 JASPAR yes 35806944
chr1 226495338 226495353 FOXA1 JASPAR yes 35806945
chr1 226495338 226495354 POU4F2 JASPAR yes 35806946
chr1 226495338 226495354 POU4F3 JASPAR yes 35806947
chr1 226495339 226495350 FOXB1 JASPAR yes 35806948
chr1 226495339 226495350 FOXC1 JASPAR yes 35806949
chr1 226495339 226495350 PROP1 JASPAR yes 35806950
chr1 226495339 226495351 FOXC2 JASPAR yes 35806951
chr1 226495340 226495352 FOXI1 JASPAR yes 35806952
chr1 226495341 226495355 ONECUT2 JASPAR yes 35806953
chr1 226495341 226495355 ONECUT3 JASPAR yes 35806954
chr1 226495341 226495356 FOXP1 JASPAR yes 35806955
chr1 226495341 226495356 HNF1A JASPAR yes 35806956
chr1 226495342 226495356 POU4F1 JASPAR yes 35806957
chr1 226495342 226495357 FOXA1 JASPAR yes 35806958
chr1 226495343 226495354 FOXB1 JASPAR yes 35806959
chr1 226495343 226495354 FOXC1 JASPAR yes 35806960
chr1 226495343 226495354 PROP1 JASPAR yes 35806961
chr1 226495343 226495355 FOXC2 JASPAR yes 35806962
chr1 226495344 226495356 FOXI1 JASPAR yes 35806963
Genes associated with rs540339538[chr1:226495349], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More