EnhancerDB
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  3. rs540372006[chr1:172921196]
Enhancers that have rs540372006[chr1:172921196]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 172914365 172932235 enh27246
Prostate (PC-3) Large Intestine Esophagus Astrocyte Bone (Osteoblast) Muscle (Myoblast) Muscle (Myotube) Stomach
chr1 172920935 172921277 vista3931
VISTA
Transcript factors that have rs540372006[chr1:172921196]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 172921048 172921312 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107846507
chr1 172921048 172921329 CEBPB UCSC Txn Factor no Conserved 107846508
chr1 172921055 172921311 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107846509
chr1 172921062 172921326 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107846510
chr1 172921183 172921198 SCRT1 JASPAR yes 33170501
chr1 172921183 172921198 SCRT1 JASPAR yes 118400923
chr1 172921190 172921201 CEBPB JASPAR yes 33170502
chr1 172921190 172921201 CEBPB JASPAR yes 118400924
chr1 172921190 172921202 DBP JASPAR yes 33170503
chr1 172921190 172921202 HLF JASPAR yes 33170504
chr1 172921190 172921202 TEF JASPAR yes 33170505
chr1 172921190 172921202 DBP JASPAR yes 118400925
chr1 172921190 172921202 HLF JASPAR yes 118400926
chr1 172921190 172921202 TEF JASPAR yes 118400927
chr1 172921191 172921201 CEBPB JASPAR yes 33170506
chr1 172921191 172921201 CEBPD JASPAR yes 33170507
chr1 172921191 172921201 CEBPE JASPAR yes 33170508
chr1 172921191 172921201 CEBPG JASPAR yes 33170509
chr1 172921191 172921201 CEBPB JASPAR yes 118400928
chr1 172921191 172921201 CEBPD JASPAR yes 118400929
chr1 172921191 172921201 CEBPE JASPAR yes 118400930
chr1 172921191 172921201 CEBPG JASPAR yes 118400931
chr1 172921195 172921205 EN2 JASPAR yes 33170510
chr1 172921195 172921205 EN2 JASPAR yes 118400932
Genes associated with rs540372006[chr1:172921196], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More