EnhancerDB
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  3. rs540374601[chr1:23512972]
Enhancers that have rs540374601[chr1:23512972]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 23509245 23517808 enh11607
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Astrocyte Placenta Colon (HCT116) Lung (PC-9) Muscle (Myoblast) Muscle (Myotube)
Transcript factors that have rs540374601[chr1:23512972]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 23512962 23512977 NR2C2 JASPAR yes 27420869
chr1 23512967 23512986 RFX2 JASPAR yes 27420870
chr1 23512969 23512984 RFX5 JASPAR yes 27420871
Genes associated with rs540374601[chr1:23512972], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More