EnhancerDB
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Enhancers that have rs540393502[chr17:48727099]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 48721505 48732375 enh81219
Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Stomach Colon (HCT116) Lung (PC-9) Epithelial (MCF-7)
Transcript factors that have rs540393502[chr17:48727099]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 48726442 48727448 TCF7L2 GTRD no Colon (HCT116) 21769882
chr17 48726442 48727448 TCF7L2 GTRD no Colon (HCT116) 108271049
chr17 48726457 48727523 ZNF143 GTRD no Epithelial (MCF-7) 21769883
chr17 48726457 48727523 ZNF143 GTRD no Epithelial (MCF-7) 108271050
chr17 48726511 48727384 ZNF143 GTRD no Epithelial (MCF-7) 21769884
chr17 48726511 48727384 ZNF143 GTRD no Epithelial (MCF-7) 108271052
chr17 48726524 48727400 TCF7L2 GTRD no Colon (HCT116) 21769885
chr17 48726524 48727400 TCF7L2 GTRD no Colon (HCT116) 108271053
chr17 48726597 48727344 TCF7L2 GTRD no Colon (HCT116) 21769886
chr17 48726597 48727344 TCF7L2 GTRD no Colon (HCT116) 108271055
chr17 48726690 48727382 ZNF143 GTRD no Epithelial (MCF-7) 21769888
chr17 48726690 48727382 ZNF143 GTRD no Epithelial (MCF-7) 108271067
chr17 48727078 48727099 ZNF263 JASPAR yes 54711442
chr17 48727081 48727102 ZNF263 JASPAR yes 54711443
chr17 48727082 48727103 ZNF263 JASPAR yes 54711446
chr17 48727085 48727106 ZNF263 JASPAR yes 54711447
chr17 48727086 48727107 ZNF263 JASPAR yes 54711450
chr17 48727089 48727110 ZNF263 JASPAR yes 54711451
chr17 48727090 48727111 ZNF263 JASPAR yes 54711453
chr17 48727091 48727112 IRF1 JASPAR yes 54711454
chr17 48727092 48727113 ZNF263 JASPAR yes 54711455
chr17 48727093 48727114 IRF1 JASPAR yes 54711456
chr17 48727093 48727114 ZNF263 JASPAR yes 54711457
chr17 48727095 48727110 PRDM1 JASPAR yes 54711458
chr17 48727096 48727117 ZNF263 JASPAR yes 54711459
chr17 48727099 48727120 IRF1 JASPAR yes 54711460
Genes associated with rs540393502[chr17:48727099], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More