EnhancerDB
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  3. rs540425570[chr1:156094650]
Enhancers that have rs540425570[chr1:156094650]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 156086105 156099215 enh12295
Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-SH) Bone (Osteoblast) Lung Blood (GM12878) Muscle (A673) Placenta Colon (HCT116) Muscle (Myoblast) Pancreas Pancreas (Panc1) Neural Stem Cells (H9) Blood (T-cell) Heart
Transcript factors that have rs540425570[chr1:156094650]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 156094451 156097369 POLR2A UCSC Txn Factor no Conserved 107835968
chr1 156094611 156095047 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21341895
chr1 156094611 156095047 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107835969
chr1 156094644 156094657 NFKB2 JASPAR yes 32376670
chr1 156094647 156094652 GATA1 TRANSFAC yes 32376671
Genes associated with rs540425570[chr1:156094650], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More