EnhancerDB
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  3. rs540428121[chr1:8810258]
Enhancers that have rs540428121[chr1:8810258]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 8791554 8810695 enh11475
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Esophagus Astrocyte Placenta Lung (PC-9) Muscle (Myoblast) Thymus Epithelial (MCF-7)
Transcript factors that have rs540428121[chr1:8810258]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 8810242 8810263 IRF1 JASPAR yes 26595772
chr1 8810245 8810259 IRF8 JASPAR yes 26595774
chr1 8810249 8810262 SMAD2 JASPAR yes 26595775
Genes associated with rs540428121[chr1:8810258], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More