EnhancerDB
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  3. rs540512247[chr17:78471652]
Enhancers that have rs540512247[chr17:78471652]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 78469656 78481421 enh32370
Cervix (HeLa-S3) Astrocyte Bone (Osteoblast) Muscle (Myoblast) Muscle (Myotube) Uterus
Transcript factors that have rs540512247[chr17:78471652]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 78471145 78473290 ZNF274 GTRD no Blood (GM12878) 108307086
chr17 78471158 78472486 ZNF143 GTRD no Epithelial (MCF-7) 108307087
chr17 78471193 78473077 TCF7L2 GTRD no Colon (HCT116) 108307088
chr17 78471485 78472993 ZNF143 GTRD no Epithelial (MCF-7) 108307089
chr17 78471490 78473365 ZNF274 GTRD no Blood (GM12878) 108307090
chr17 78471499 78473081 TCF7L2 GTRD no Colon (HCT116) 108307091
chr17 78471540 78472459 TCF7L2 GTRD no Colon (HCT116) 108307092
chr17 78471638 78471653 PRDM1 JASPAR yes 56248016
chr17 78471638 78471653 STAT2 JASPAR yes 56248017
chr17 78471646 78471956 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108307093
chr17 78471648 78471668 RREB1 JASPAR yes 56248018
Genes associated with rs540512247[chr17:78471652], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More