EnhancerDB
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  3. rs540533909[chr1:7531519]
Enhancers that have rs540533909[chr1:7531519]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 7527289 7545958 enh11454
Astrocyte Adrenal Pancreas Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Breast Muscle (Myoblast) Spleen Lung Muscle (A673) Heart
chr1 7531062 7531540 vista196
VISTA
Transcript factors that have rs540533909[chr1:7531519]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 7531509 7531519 RORA JASPAR yes 26466757
chr1 7531509 7531519 RORA JASPAR yes 118222538
Genes associated with rs540533909[chr1:7531519], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More