EnhancerDB
  1. Home
  2. SNP
  3. rs540543019[chr17:2251933]
Enhancers that have rs540543019[chr17:2251933]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 2244803 2253610 enh16932
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Lung (PC-9) Stomach Muscle (A673) Placenta Colon (HCT116) Muscle (Myoblast) Pancreas Muscle (Myotube) Epithelial (MCF-7)
Transcript factors that have rs540543019[chr17:2251933]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 2251918 2251934 RFX4 JASPAR yes 52747793
chr17 2251926 2251937 NFE2L2 JASPAR yes 52747794
chr17 2251927 2251938 FOS JASPAR yes 52747795
chr17 2251927 2251938 FOSL1 JASPAR yes 52747796
chr17 2251928 2251939 FOSL2 JASPAR yes 52747797
chr17 2251928 2251939 JUNB JASPAR yes 52747798
chr17 2251928 2251942 JUN JASPAR yes 52747799
chr17 2251929 2251940 BATF JASPAR yes 52747800
Genes associated with rs540543019[chr17:2251933], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More