-
Home
- SNP
- rs540566389[chr5:172710617]
Enhancers that have rs540566389[chr5:172710617]
Back to top
| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr5 |
172707053 |
172713046 |
enh66138 |
|
|
Transcript factors that have rs540566389[chr5:172710617]
Back to top
| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr5
|
172710548
|
172711198
|
E2F1
|
UCSC Txn Factor
|
no
|
Conserved
|
108537547
|
|
|
chr5
|
172710611
|
172710627
|
NFYA
|
JASPAR
|
yes
|
|
67863042
|
|
|
chr5
|
172710616
|
172710620
|
H1TF2
|
TRANSFAC
|
yes
|
|
67863043
|
|
|
chr5
|
172710616
|
172710620
|
NFE
|
TRANSFAC
|
yes
|
|
67863044
|
|
|
chr5
|
172710616
|
172710620
|
SRF
|
TRANSFAC
|
yes
|
|
67863045
|
|
|
chr5
|
172710616
|
172710622
|
NFYC
|
TRANSFAC
|
yes
|
|
67863046
|
|
Genes associated with rs540566389[chr5:172710617], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |