EnhancerDB
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  3. rs540575844[chr1:17240085]
Enhancers that have rs540575844[chr1:17240085]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 17219841 17243115 enh90
Cervix (HeLa-S3) Prostate (RWPE1) Blood (T-cell) Bone (Osteoblast) Blood (OCI-LY7) Blood (GM12878) Placenta Colon (HCT116) Peripheral Blood (MM.1S) Blood (Karpas-422) Pancreas (Panc1) Uterus Thymus
Transcript factors that have rs540575844[chr1:17240085]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 17238935 17240465 ZBTB33 GTRD no Lung (A549) 107802245
chr1 17240075 17240095 ESR1 JASPAR yes 27065024
chr1 17240078 17240093 HNF4G JASPAR yes 27065025
chr1 17240079 17240094 HNF4A JASPAR yes 27065026
chr1 17240080 17240095 ESR2 JASPAR yes 27065027
chr1 17240080 17240100 ESR1 JASPAR yes 27065028
Genes associated with rs540575844[chr1:17240085], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More