EnhancerDB
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  3. rs540584386[chr1:201268921]
Enhancers that have rs540584386[chr1:201268921]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 201263092 201282279 enh12518
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Epithelial (MCF-7) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Esophagus Lung (PC-9) Brain (SK-N-SH) Bone (Osteoblast) Muscle (A673) Placenta Thyroid Muscle (Myoblast) Breast Thymus Heart
Transcript factors that have rs540584386[chr1:201268921]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 201268909 201268922 SCRT2 JASPAR yes 34488186
chr1 201268909 201268924 SCRT1 JASPAR yes 34488187
Genes associated with rs540584386[chr1:201268921], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More