EnhancerDB
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  3. rs540591432[chr12:122952792]
Enhancers that have rs540591432[chr12:122952792]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 122929045 122955735 enh15070
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Blood (T-cell) Blood (OCI-LY7) Placenta Colon (HCT116) Thyroid Peripheral Blood (MM.1S) Lung (PC-9) Muscle (Myoblast) Thymus Epithelial (MCF-7)
chr12 122952702 122952803 vista15208
VISTA
Transcript factors that have rs540591432[chr12:122952792]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 122950737 122953032 ZBTB33 GTRD no Lung (A549) 108065921
chr12 122950940 122953038 TCF7L2 GTRD no Colon (HCT116) 21580072
chr12 122950940 122953038 TCF7L2 GTRD no Colon (HCT116) 108065922
chr12 122951138 122952906 ZNF274 GTRD no Cervix (HeLa-S3) 21580073
chr12 122951138 122952906 ZNF274 GTRD no Cervix (HeLa-S3) 108065923
chr12 122951166 122953120 ZBTB33 GTRD no Lung (A549) 108065924
chr12 122951209 122953004 ZNF274 GTRD no Blood (GM12878) 108065925
chr12 122951225 122952932 ZNF274 GTRD no Blood (GM12878) 108065926
chr12 122951234 122952918 ZNF274 GTRD no Blood (GM12878) 108065927
chr12 122951253 122953084 ZNF274 GTRD no Blood (GM12878) 108065928
chr12 122951264 122953331 ZBTB33 GTRD no Lung (A549) 108065929
chr12 122951327 122953269 ZNF274 GTRD no Blood (GM12878) 108065930
chr12 122951354 122953170 ZBTB33 GTRD no Lung (A549) 108065931
chr12 122951372 122952912 ZBTB33 GTRD no Lung (A549) 108065932
chr12 122951416 122952915 ZNF274 GTRD no Bone Marrow (K562) 108065933
chr12 122951585 122953145 ZBTB33 GTRD no Lung (A549) 108065935
chr12 122951599 122953081 ZNF274 GTRD no Blood (GM12878) 108065936
chr12 122951668 122953215 ZNF274 GTRD no Cervix (HeLa-S3) 21580089
chr12 122951668 122953215 ZNF274 GTRD no Cervix (HeLa-S3) 108065938
chr12 122951690 122953264 ZBTB33 GTRD no Lung (A549) 108065939
chr12 122951724 122952824 ZNF274 GTRD no Blood (GM12878) 108065940
chr12 122951802 122953002 ZNF274 GTRD no Liver (HepG2) 21580090
chr12 122951802 122953002 ZNF274 GTRD no Liver (HepG2) 108065941
chr12 122951838 122953123 ZBTB33 GTRD no Lung (A549) 108065942
chr12 122951917 122952978 ZNF143 GTRD no Epithelial (MCF-7) 21580091
chr12 122951917 122952978 ZNF143 GTRD no Epithelial (MCF-7) 108065944
chr12 122951918 122953192 ZNF143 GTRD no Epithelial (MCF-7) 21580092
chr12 122951918 122953192 ZNF143 GTRD no Epithelial (MCF-7) 108065945
chr12 122951933 122953105 ZNF143 GTRD no Epithelial (MCF-7) 21580093
chr12 122951933 122953105 ZNF143 GTRD no Epithelial (MCF-7) 108065946
chr12 122951936 122953270 ZNF274 GTRD no Bone Marrow (K562) 108065947
chr12 122951939 122953418 ZNF143 GTRD no Epithelial (MCF-7) 21580094
chr12 122951939 122953418 ZNF143 GTRD no Epithelial (MCF-7) 108065948
chr12 122951940 122953130 ZNF274 GTRD no Blood (GM12878) 108065949
chr12 122951962 122953155 ZNF143 GTRD no Epithelial (MCF-7) 21580096
chr12 122951962 122953155 ZNF143 GTRD no Epithelial (MCF-7) 108065953
chr12 122951996 122952854 ZNF143 GTRD no Epithelial (MCF-7) 21580097
chr12 122951996 122952854 ZNF143 GTRD no Epithelial (MCF-7) 108065955
chr12 122952031 122952840 ZBTB33 GTRD no Lung (A549) 108065956
chr12 122952040 122952896 ZNF143 GTRD no Epithelial (MCF-7) 21580098
chr12 122952040 122952896 ZNF143 GTRD no Epithelial (MCF-7) 108065957
chr12 122952051 122952799 ZBTB33 GTRD no Lung (A549) 108065958
chr12 122952053 122952918 ZNF274 GTRD no Blood (GM12878) 108065959
chr12 122952064 122953012 ZBTB33 GTRD no Lung (A549) 108065960
chr12 122952071 122952909 ZNF274 GTRD no Bone Marrow (K562) 108065961
chr12 122952082 122953061 ZNF274 GTRD no Bone Marrow (K562) 108065962
chr12 122952086 122952897 ZNF274 GTRD no Bone Marrow (K562) 108065963
chr12 122952092 122953091 ZNF143 GTRD no Epithelial (MCF-7) 21580099
chr12 122952092 122953091 ZNF143 GTRD no Epithelial (MCF-7) 108065964
chr12 122952102 122952997 CTCF GTRD no Spleen 108065965
chr12 122952105 122952884 ZNF143 GTRD no Epithelial (MCF-7) 21580100
chr12 122952105 122952884 ZNF143 GTRD no Epithelial (MCF-7) 108065966
chr12 122952106 122952809 ZNF274 GTRD no Bone Marrow (K562) 108065967
chr12 122952112 122952957 ZNF143 GTRD no Epithelial (MCF-7) 21580101
chr12 122952112 122952957 ZNF143 GTRD no Epithelial (MCF-7) 108065968
chr12 122952112 122952976 ZNF274 GTRD no Liver (HepG2) 21580102
chr12 122952112 122952976 ZNF274 GTRD no Liver (HepG2) 108065969
chr12 122952119 122952823 ZNF143 GTRD no Epithelial (MCF-7) 21580103
chr12 122952119 122952823 ZNF143 GTRD no Epithelial (MCF-7) 108065972
chr12 122952125 122952956 ZNF274 GTRD no Bone Marrow (K562) 108065973
chr12 122952129 122952818 ZNF274 GTRD no Blood (GM12878) 108065974
chr12 122952144 122952808 ZNF274 GTRD no Bone Marrow (K562) 108065976
chr12 122952150 122952908 ZBTB33 GTRD no Lung (A549) 108065977
chr12 122952157 122952920 ZNF274 GTRD no Bone Marrow (K562) 108065978
chr12 122952159 122952809 ZBTB33 GTRD no Lung (A549) 108065979
chr12 122952160 122952847 ZNF274 GTRD no Liver (HepG2) 21580105
chr12 122952160 122952847 ZNF274 GTRD no Liver (HepG2) 108065981
chr12 122952167 122952840 ZNF274 GTRD no Bone Marrow (K562) 108065984
chr12 122952168 122952848 ZNF274 GTRD no Bone Marrow (K562) 108065985
chr12 122952182 122952802 ZNF274 GTRD no Blood (GM12878) 108065988
chr12 122952184 122952885 ZNF143 GTRD no Epithelial (MCF-7) 21580110
chr12 122952184 122952885 ZNF143 GTRD no Epithelial (MCF-7) 108065990
chr12 122952191 122952817 CTCF GTRD no Kidney 108065991
chr12 122952198 122952876 CTCF GTRD no Lung 108065993
chr12 122952210 122952817 ZNF143 GTRD no Epithelial (MCF-7) 21580113
chr12 122952210 122952817 ZNF143 GTRD no Epithelial (MCF-7) 108065996
chr12 122952231 122952839 ZNF274 GTRD no Bone Marrow (K562) 108066000
chr12 122952235 122953056 ZBTB33 GTRD no Lung (A549) 108066001
chr12 122952242 122953103 ZNF143 GTRD no Epithelial (MCF-7) 21580118
chr12 122952242 122953103 ZNF143 GTRD no Epithelial (MCF-7) 108066002
chr12 122952250 122952824 ZNF274 GTRD no Cervix (HeLa-S3) 21580119
chr12 122952250 122952824 ZNF274 GTRD no Cervix (HeLa-S3) 108066004
chr12 122952255 122953059 ZNF274 GTRD no Bone Marrow (K562) 108066005
chr12 122952263 122952909 ZNF274 GTRD no Bone Marrow (K562) 108066007
chr12 122952273 122953024 ZNF274 GTRD no Blood (GM12878) 108066008
chr12 122952709 122952982 ZNF274 GTRD no Bone Marrow (K562) 108066016
chr12 122952785 122952800 JUND JASPAR yes 82491691
chr12 122952785 122952800 JUND JASPAR yes 124283325
chr12 122952786 122952799 JUN JASPAR yes 82491692
chr12 122952786 122952799 JUN JASPAR yes 124283326
chr12 122952787 122952794 JUN TRANSFAC yes 82491693
chr12 122952787 122952794 JUN TRANSFAC yes 124283327
Genes associated with rs540591432[chr12:122952792], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More