EnhancerDB
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Enhancers that have rs540605276[chr16:88527740]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 88521345 88553535 enh4185
Bone Marrow (K562) Brain (SK-N-SH) Epithelial (MCF-7) Large Intestine Prostate (RWPE1) Liver Blood (T-cell) Lung Blood (OCI-LY7) Stomach Muscle (A673) Placenta Colon (HCT116) Blood (Karpas-422) Pancreas Thymus Heart
Transcript factors that have rs540605276[chr16:88527740]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 88521149 88529068 TCF7L2 GTRD no Colon (HCT116) 21736458
chr16 88521149 88529068 TCF7L2 GTRD no Colon (HCT116) 108222237
chr16 88524147 88537001 ZNF143 GTRD no Epithelial (MCF-7) 21736463
chr16 88524147 88537001 ZNF143 GTRD no Epithelial (MCF-7) 108222245
chr16 88524147 88537001 ZNF143 GTRD no Epithelial (MCF-7) 108222246
chr16 88524147 88537001 ZNF143 GTRD no Epithelial (MCF-7) 108222247
chr16 88527726 88527746 RREB1 JASPAR yes 12286800
chr16 88527729 88527743 PLAG1 JASPAR yes 12286801
chr16 88527731 88527741 SP1 JASPAR yes 12286802
chr16 88527736 88527742 MZF1 JASPAR yes 12286803
chr16 88527740 88527754 ZIC1 JASPAR yes 12286804
Genes associated with rs540605276[chr16:88527740], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More