EnhancerDB
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  3. rs540630420[chr6:25416713]
Enhancers that have rs540630420[chr6:25416713]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 25402146 25419595 enh49068
Cervix (HeLa-S3) Brain (SK-N-MC) Large Intestine Blood (T-cell) Blood (OCI-LY7) Blood (GM12878) Peripheral Blood (MM.1S) Adrenal Thymus Stomach
Transcript factors that have rs540630420[chr6:25416713]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 25416709 25416719 GSC2 JASPAR yes 100857855
chr6 25416710 25416718 OTX1 JASPAR yes 100857856
chr6 25416710 25416718 OTX2 JASPAR yes 100857857
Genes associated with rs540630420[chr6:25416713], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More