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- rs540660180[chr17:6470549]
Enhancers that have rs540660180[chr17:6470549]
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| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr17 |
6468612 |
6473909 |
enh58734 |
|
|
Transcript factors that have rs540660180[chr17:6470549]
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| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr17
|
6470021
|
6471728
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108233350
|
|
|
chr17
|
6470164
|
6471800
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108233351
|
|
|
chr17
|
6470209
|
6473724
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108233352
|
|
|
chr17
|
6470222
|
6470849
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108233353
|
|
|
chr17
|
6470344
|
6471467
|
ZNF274
|
GTRD
|
no
|
Blood (GM12878)
|
108233354
|
|
|
chr17
|
6470414
|
6471269
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108233355
|
|
|
chr17
|
6470460
|
6471861
|
ZNF274
|
GTRD
|
no
|
Cervix (HeLa-S3)
|
108233356
|
|
|
chr17
|
6470462
|
6471381
|
ZNF274
|
GTRD
|
no
|
Cervix (HeLa-S3)
|
108233357
|
|
|
chr17
|
6470468
|
6474467
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108233358
|
|
|
chr17
|
6470473
|
6471344
|
ZNF274
|
GTRD
|
no
|
Bone Marrow (K562)
|
108233359
|
|
|
chr17
|
6470487
|
6473126
|
ZNF274
|
GTRD
|
no
|
Cervix (HeLa-S3)
|
108233360
|
|
|
chr17
|
6470494
|
6471347
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108233361
|
|
|
chr17
|
6470502
|
6471452
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108233362
|
|
|
chr17
|
6470516
|
6471119
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108233363
|
|
|
chr17
|
6470527
|
6471426
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108233364
|
|
|
chr17
|
6470533
|
6471189
|
ZNF274
|
GTRD
|
no
|
Blood (GM12878)
|
108233365
|
|
|
chr17
|
6470544
|
6471135
|
ZNF274
|
GTRD
|
no
|
Liver (HepG2)
|
108233366
|
|
|
chr17
|
6470547
|
6470556
|
NKX2-8
|
JASPAR
|
yes
|
|
52918464
|
|
|
chr17
|
6470547
|
6470557
|
NKX2-3
|
JASPAR
|
yes
|
|
52918465
|
|
|
chr17
|
6470548
|
6470556
|
ISL2
|
JASPAR
|
yes
|
|
52918466
|
|
|
chr17
|
6470548
|
6470557
|
NKX3-2
|
JASPAR
|
yes
|
|
52918467
|
|
Genes associated with rs540660180[chr17:6470549], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |