EnhancerDB
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  3. rs540686108[chr1:222131006]
Enhancers that have rs540686108[chr1:222131006]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 222129374 222148777 enh27556
Bone Marrow (K562) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Astrocyte Lung (A549) Colon (HCT116) Peripheral Blood (MM.1S) Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs540686108[chr1:222131006]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 222130993 222131013 TBX19 JASPAR yes 35585333
chr1 222131001 222131013 E2F8 JASPAR yes 35585334
chr1 222131002 222131013 TBX20 JASPAR yes 35585335
chr1 222131003 222131011 TBX15 JASPAR yes 35585336
chr1 222131004 222131009 SP1 TRANSFAC yes 35585337
Genes associated with rs540686108[chr1:222131006], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More