EnhancerDB
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  3. rs540739220[chr1:55256868]
Enhancers that have rs540739220[chr1:55256868]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 55256157 55264035 enh11874
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-SH) Large Intestine Esophagus Bone (Osteoblast) Placenta Lung (PC-9) Pancreas Uterus Epithelial (MCF-7)
Transcript factors that have rs540739220[chr1:55256868]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 55256857 55256870 NR2F1 JASPAR yes 28998592
chr1 55256860 55256875 HNF4A JASPAR yes 28998593
chr1 55256861 55256875 NR2F1 JASPAR yes 28998594
chr1 55256861 55256875 RXRG JASPAR yes 28998595
chr1 55256861 55256876 HNF4G JASPAR yes 28998596
Genes associated with rs540739220[chr1:55256868], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More