EnhancerDB
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  3. rs540749964[chr1:24235341]
Enhancers that have rs540749964[chr1:24235341]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 24220965 24239635 enh130
Bone Marrow (K562) Prostate (PC-3) Brain (SK-N-SH) Brain (SK-N-MC) Blood (T-cell) Blood (OCI-LY7) Blood (GM12878) Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Thymus Stomach
Transcript factors that have rs540749964[chr1:24235341]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 24235333 24235993 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107802438
chr1 24235337 24235350 ZBTB18 JASPAR yes 27465365
chr1 24235338 24235350 NHLH1 JASPAR yes 27465366
chr1 24235339 24235349 NHLH1 JASPAR yes 27465367
chr1 24235340 24235353 SCRT2 JASPAR yes 27465368
Genes associated with rs540749964[chr1:24235341], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More