EnhancerDB
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  3. rs540771593[chr17:64946237]
Enhancers that have rs540771593[chr17:64946237]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 64937699 64952845 enh17319
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Muscle (A673) Placenta Thyroid Embryonic Stem Cell Line (H1-hESC) Lung (PC-9) Breast Pancreas (Panc1) Muscle (Myotube) Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs540771593[chr17:64946237]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 64946211 64946501 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21781973
chr17 64946229 64946250 IRF1 JASPAR yes 55473072
chr17 64946233 64946248 STAT2 JASPAR yes 55473073
chr17 64946234 64946249 FOXP1 JASPAR yes 55473074
chr17 64946236 64946256 RREB1 JASPAR yes 55473075
chr17 64946237 64946248 FOXP2 JASPAR yes 55473076
Genes associated with rs540771593[chr17:64946237], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More