EnhancerDB
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  3. rs540788483[chr1:165561048]
Enhancers that have rs540788483[chr1:165561048]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 165560285 165570275 enh98553
Cervix (HeLa-S3) Brain (SK-N-MC) Peripheral Blood (MM.1S) Pancreas (Panc1) Uterus
Transcript factors that have rs540788483[chr1:165561048]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 165561033 165561048 TFAP2A JASPAR yes 32791216
chr1 165561033 165561048 TFAP2C JASPAR yes 32791217
chr1 165561036 165561048 TFAP2A JASPAR yes 32791220
chr1 165561036 165561048 TFAP2B JASPAR yes 32791221
chr1 165561036 165561048 TFAP2C JASPAR yes 32791222
chr1 165561044 165561054 HESX1 JASPAR yes 32791223
chr1 165561044 165561054 RAX JASPAR yes 32791224
chr1 165561045 165561049 H1TF2 TRANSFAC yes 32791225
chr1 165561045 165561049 NFE TRANSFAC yes 32791226
chr1 165561045 165561049 SRF TRANSFAC yes 32791227
chr1 165561045 165561053 DLX6 JASPAR yes 32791228
chr1 165561045 165561053 MSX2 JASPAR yes 32791229
Genes associated with rs540788483[chr1:165561048], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More