EnhancerDB
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  3. rs540814587[chr1:200400147]
Enhancers that have rs540814587[chr1:200400147]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 200395745 200424875 enh27417
Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Astrocyte Peripheral Blood (MM.1S) Lung (PC-9) Neural Stem Cells (H9) Thymus Epithelial (MCF-7)
Transcript factors that have rs540814587[chr1:200400147]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 200397423 200403660 AR GTRD no Prostate (PC-3) 21363463
chr1 200397423 200403660 AR GTRD no Prostate (PC-3) 107855280
chr1 200399861 200400386 ZNF143 GTRD no Epithelial (MCF-7) 21363465
chr1 200400131 200400152 IRF1 JASPAR yes 34446155
chr1 200400136 200400157 IRF1 JASPAR yes 34446157
chr1 200400137 200400152 FOXP1 JASPAR yes 34446158
chr1 200400137 200400158 IRF1 JASPAR yes 34446159
chr1 200400138 200400150 FOXC2 JASPAR yes 34446160
chr1 200400141 200400156 FOXP1 JASPAR yes 34446162
chr1 200400142 200400157 FOXP1 JASPAR yes 34446163
chr1 200400143 200400158 FOXP1 JASPAR yes 34446164
chr1 200400144 200400159 FOXP1 JASPAR yes 34446165
Genes associated with rs540814587[chr1:200400147], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More