EnhancerDB
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  3. rs540839424[chr1:153550195]
Enhancers that have rs540839424[chr1:153550195]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 153548105 153553735 enh12270
Skin (Keratinocyte) Cervix (HeLa-S3) Esophagus Bone (Osteoblast) Placenta Colon (HCT116) Muscle (Myotube)
Transcript factors that have rs540839424[chr1:153550195]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 153541617 153550889 ZBTB33 GTRD no Lung (A549) 107831577
chr1 153541617 153550889 ZBTB33 GTRD no Lung (A549) 107831578
chr1 153546819 153550917 ZBTB33 GTRD no Lung (A549) 107831662
chr1 153547048 153550450 ZBTB33 GTRD no Lung (A549) 107831664
chr1 153547472 153550395 ZBTB33 GTRD no Lung (A549) 107831665
chr1 153547635 153550766 ZBTB33 GTRD no Lung (A549) 107831666
chr1 153547846 153550378 ZBTB33 GTRD no Lung (A549) 107831667
chr1 153548130 153550827 TCF7L2 GTRD no Colon (HCT116) 21339724
chr1 153548130 153550827 TCF7L2 GTRD no Colon (HCT116) 107831671
chr1 153548530 153550448 TCF7L2 GTRD no Colon (HCT116) 21339727
chr1 153548530 153550448 TCF7L2 GTRD no Colon (HCT116) 107831675
chr1 153548565 153550475 ZBTB33 GTRD no Lung (A549) 107831676
chr1 153548697 153550403 ZBTB33 GTRD no Lung (A549) 107831680
chr1 153548890 153550256 ZNF274 GTRD no Cervix (HeLa-S3) 21339728
chr1 153548890 153550256 ZNF274 GTRD no Cervix (HeLa-S3) 107831688
chr1 153548954 153550403 ZBTB33 GTRD no Lung (A549) 107831696
chr1 153549010 153550434 ZBTB33 GTRD no Lung (A549) 107831701
chr1 153550029 153550957 P63 GTRD no Skin (Keratinocyte) 21339740
Genes associated with rs540839424[chr1:153550195], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More