-
Home
- SNP
- rs540854600[chr1:16108216]
Enhancers that have rs540854600[chr1:16108216]
Back to top
| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr1 |
16104065 |
16109795 |
enh49667 |
|
|
Transcript factors that have rs540854600[chr1:16108216]
Back to top
| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr1
|
16108200
|
16108218
|
NR3C1
|
JASPAR
|
yes
|
|
27000447
|
|
|
chr1
|
16108206
|
16108220
|
ONECUT2
|
JASPAR
|
yes
|
|
27000448
|
|
|
chr1
|
16108206
|
16108220
|
ONECUT3
|
JASPAR
|
yes
|
|
27000449
|
|
|
chr1
|
16108207
|
16108228
|
IRF1
|
JASPAR
|
yes
|
|
27000450
|
|
|
chr1
|
16108208
|
16108223
|
FOXP1
|
JASPAR
|
yes
|
|
27000451
|
|
|
chr1
|
16108208
|
16108229
|
IRF1
|
JASPAR
|
yes
|
|
27000452
|
|
|
chr1
|
16108209
|
16108218
|
SRY
|
JASPAR
|
yes
|
|
27000453
|
|
|
chr1
|
16108209
|
16108221
|
FOXC2
|
JASPAR
|
yes
|
|
27000454
|
|
|
chr1
|
16108209
|
16108230
|
IRF1
|
JASPAR
|
yes
|
|
27000455
|
|
|
chr1
|
16108210
|
16108225
|
FOXP1
|
JASPAR
|
yes
|
|
27000456
|
|
|
chr1
|
16108210
|
16108231
|
IRF1
|
JASPAR
|
yes
|
|
27000457
|
|
|
chr1
|
16108211
|
16108232
|
IRF1
|
JASPAR
|
yes
|
|
27000458
|
|
|
chr1
|
16108212
|
16108227
|
FOXP1
|
JASPAR
|
yes
|
|
27000459
|
|
|
chr1
|
16108213
|
16108228
|
FOXP1
|
JASPAR
|
yes
|
|
27000460
|
|
|
chr1
|
16108214
|
16108229
|
FOXP1
|
JASPAR
|
yes
|
|
27000461
|
|
|
chr1
|
16108215
|
16108230
|
FOXP1
|
JASPAR
|
yes
|
|
27000462
|
|
|
chr1
|
16108216
|
16108231
|
FOXP1
|
JASPAR
|
yes
|
|
27000463
|
|
Genes associated with rs540854600[chr1:16108216], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |