EnhancerDB
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  3. rs540855877[chr17:56441442]
Enhancers that have rs540855877[chr17:56441442]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 56439825 56447075 enh17249
Blood (OCI-LY7) Placenta Peripheral Blood (MM.1S) Thymus Stomach
Transcript factors that have rs540855877[chr17:56441442]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 56440984 56441858 P63 GTRD no Skin (Keratinocyte) 108275181
chr17 56441028 56442233 ZNF274 GTRD no Cervix (HeLa-S3) 108275182
chr17 56441078 56442044 ZNF274 GTRD no Cervix (HeLa-S3) 108275183
chr17 56441132 56442014 ZNF274 GTRD no Cervix (HeLa-S3) 108275184
chr17 56441178 56441806 ZNF143 GTRD no Epithelial (MCF-7) 108275185
chr17 56441222 56441779 ZBTB33 GTRD no Brain (SK-N-SH) 108275186
chr17 56441227 56441902 ZBTB33 GTRD no Brain (SK-N-SH) 108275187
chr17 56441230 56441830 TEF1 GTRD no Bone (Osteoblast) 108275188
chr17 56441235 56441896 ZBTB33 GTRD no Lung (A549) 108275189
chr17 56441266 56441998 ZNF274 GTRD no Cervix (HeLa-S3) 108275190
chr17 56441274 56441805 ZBTB33 GTRD no Brain (SK-N-SH) 108275191
chr17 56441314 56441884 ZNF274 GTRD no Cervix (HeLa-S3) 108275192
chr17 56441327 56441821 ZNF274 GTRD no Cervix (HeLa-S3) 108275193
chr17 56441438 56441453 TFAP2C JASPAR yes 55013684
chr17 56441440 56441453 TFAP2A JASPAR yes 55013685
chr17 56441440 56441453 TFAP2B JASPAR yes 55013686
chr17 56441440 56441453 TFAP2C JASPAR yes 55013687
Genes associated with rs540855877[chr17:56441442], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More