EnhancerDB
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  3. rs540868465[chr5:171702731]
Enhancers that have rs540868465[chr5:171702731]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 171697618 171706015 enh8879
Liver (HepG2) Cervix (HeLa-S3) Prostate (RWPE1) Esophagus Bone (Osteoblast) Blood (GM12878) Placenta Blood (Karpas-422) Lung (PC-9) Pancreas (Panc1) Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs540868465[chr5:171702731]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 171702722 171702733 NFKB1 JASPAR yes 67777826
chr5 171702731 171702735 NFE TRANSFAC yes 67777827
chr5 171702731 171702736 GATA1 TRANSFAC yes 67777828
chr5 171702731 171702737 GATA3 JASPAR yes 67777829
Genes associated with rs540868465[chr5:171702731], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More