EnhancerDB
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  3. rs540925591[chr1:42196275]
Enhancers that have rs540925591[chr1:42196275]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 42174680 42197130 enh289
Prostate (PC-3) Brain (SK-N-SH) Brain (SK-N-MC) Blood (T-cell) Astrocyte Bone (Osteoblast) Blood (GM12878) Stomach Muscle (A673) Placenta Peripheral Blood (MM.1S) Blood (Karpas-422) Muscle (Myotube) Thymus Heart
Transcript factors that have rs540925591[chr1:42196275]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 42196270 42196281 E2F1 JASPAR yes 28415011
chr1 42196270 42196284 PLAG1 JASPAR yes 28415012
Genes associated with rs540925591[chr1:42196275], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More