EnhancerDB
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  3. rs540929538[chr1:42103955]
Enhancers that have rs540929538[chr1:42103955]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 42077298 42108035 enh11792
Prostate (PC-3) Brain (SK-N-SH) Epithelial (MCF-7) Brain (SK-N-MC) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Blood (GM12878) Stomach Muscle (A673) Placenta Breast Thyroid Peripheral Blood (MM.1S) Muscle (Myoblast) Pancreas Spleen Thymus Heart
Transcript factors that have rs540929538[chr1:42103955]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 42103936 42103957 ZNF263 JASPAR yes 28404537
chr1 42103937 42103958 IRF1 JASPAR yes 28404538
chr1 42103937 42103958 ZNF263 JASPAR yes 28404539
chr1 42103939 42103960 IRF1 JASPAR yes 28404540
chr1 42103940 42103961 ZNF263 JASPAR yes 28404541
chr1 42103941 42103962 ZNF263 JASPAR yes 28404542
chr1 42103943 42103964 IRF1 JASPAR yes 28404543
chr1 42103944 42103965 ZNF263 JASPAR yes 28404544
chr1 42103945 42103966 ZNF263 JASPAR yes 28404545
chr1 42103947 42103961 SPI1 JASPAR yes 28404546
chr1 42103947 42103961 SPIC JASPAR yes 28404547
chr1 42103948 42103969 ZNF263 JASPAR yes 28404548
chr1 42103951 42103958 SPIB JASPAR yes 28404549
chr1 42103951 42103972 ZNF263 JASPAR yes 28404550
chr1 42103952 42103960 EHF JASPAR yes 28404551
chr1 42103952 42103973 ZNF263 JASPAR yes 28404552
chr1 42103955 42103976 ZNF263 JASPAR yes 28404553
Genes associated with rs540929538[chr1:42103955], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More