EnhancerDB
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  3. rs540941985[chr1:204680272]
Enhancers that have rs540941985[chr1:204680272]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 204671389 204688135 enh890
Bone Marrow (K562) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Blood (OCI-LY7) Placenta Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Thymus Epithelial (MCF-7)
Transcript factors that have rs540941985[chr1:204680272]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 204680115 204680538 ZNF143 GTRD no Epithelial (MCF-7) 21371000
chr1 204680115 204680839 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21371001
chr1 204680203 204681087 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21371002
chr1 204680220 204680471 ZNF143 GTRD no Epithelial (MCF-7) 21371003
chr1 204680258 204680694 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21371004
chr1 204680264 204680276 TGIF1 JASPAR yes 34722527
chr1 204680264 204680276 TGIF2 JASPAR yes 34722528
Genes associated with rs540941985[chr1:204680272], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More