EnhancerDB
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  3. rs540968326[chr16:88528050]
Enhancers that have rs540968326[chr16:88528050]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 88521345 88553535 enh4185
Bone Marrow (K562) Brain (SK-N-SH) Epithelial (MCF-7) Large Intestine Prostate (RWPE1) Liver Blood (T-cell) Lung Blood (OCI-LY7) Stomach Muscle (A673) Placenta Colon (HCT116) Blood (Karpas-422) Pancreas Thymus Heart
Transcript factors that have rs540968326[chr16:88528050]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 88521149 88529068 TCF7L2 GTRD no Colon (HCT116) 21736458
chr16 88521149 88529068 TCF7L2 GTRD no Colon (HCT116) 108222237
chr16 88524147 88537001 ZNF143 GTRD no Epithelial (MCF-7) 21736463
chr16 88524147 88537001 ZNF143 GTRD no Epithelial (MCF-7) 108222245
chr16 88524147 88537001 ZNF143 GTRD no Epithelial (MCF-7) 108222246
chr16 88524147 88537001 ZNF143 GTRD no Epithelial (MCF-7) 108222247
chr16 88528039 88528057 IRF2 JASPAR yes 12286828
chr16 88528046 88528060 POU4F1 JASPAR yes 12286829
chr16 88528046 88528062 POU4F2 JASPAR yes 12286830
chr16 88528046 88528062 POU4F3 JASPAR yes 12286831
chr16 88528049 88528053 YY1 TRANSFAC yes 12286832
chr16 88528050 88528062 FOXC2 JASPAR yes 12286833
chr16 88528050 88528064 ONECUT1 JASPAR yes 12286834
chr16 88528050 88528064 ONECUT2 JASPAR yes 12286835
chr16 88528050 88528064 ONECUT3 JASPAR yes 12286836
Genes associated with rs540968326[chr16:88528050], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More