EnhancerDB
  1. Home
  2. SNP
  3. rs540985224[chr18:55505087]
Enhancers that have rs540985224[chr18:55505087]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr18 55498005 55517815 enh17733
Bone Marrow (K562) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Bone (Osteoblast) Blood (GM12878) Muscle (A673) Placenta Colon (HCT116) Peripheral Blood (MM.1S) Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Thymus Stomach
Transcript factors that have rs540985224[chr18:55505087]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr18 55504978 55505574 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21823598
chr18 55505056 55505336 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21823599
chr18 55505063 55505447 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21823600
chr18 55505083 55505432 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21823601
chr18 55505084 55505094 SP1 JASPAR yes 110891132
chr18 55505086 55505091 SP1 TRANSFAC yes 110891133
Genes associated with rs540985224[chr18:55505087], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More