EnhancerDB
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  3. rs541032590[chr1:89340176]
Enhancers that have rs541032590[chr1:89340176]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 89337745 89345348 enh74298
Brain (SK-N-MC) Prostate (RWPE1) Muscle (A673) Lung (PC-9) Stomach
chr1 89339924 89340210 vista2351
VISTA
Transcript factors that have rs541032590[chr1:89340176]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 89340169 89340179 POU6F2 JASPAR yes 30582651
chr1 89340169 89340179 POU6F2 JASPAR yes 118323885
chr1 89340170 89340180 ALX3 JASPAR yes 30582652
chr1 89340170 89340180 EMX1 JASPAR yes 30582653
chr1 89340170 89340180 EMX2 JASPAR yes 30582654
chr1 89340170 89340180 ESX1 JASPAR yes 30582655
chr1 89340170 89340180 GBX2 JASPAR yes 30582656
chr1 89340170 89340180 GSX1 JASPAR yes 30582657
chr1 89340170 89340180 GSX2 JASPAR yes 30582658
chr1 89340170 89340180 HESX1 JASPAR yes 30582659
chr1 89340170 89340180 HOXB2 JASPAR yes 30582660
chr1 89340170 89340180 HOXB3 JASPAR yes 30582661
chr1 89340170 89340180 LBX2 JASPAR yes 30582662
chr1 89340170 89340180 LHX2 JASPAR yes 30582663
chr1 89340170 89340180 LHX6 JASPAR yes 30582664
chr1 89340170 89340180 MEOX1 JASPAR yes 30582665
chr1 89340170 89340180 MEOX2 JASPAR yes 30582666
chr1 89340170 89340180 MIXL1 JASPAR yes 30582667
chr1 89340170 89340180 MNX1 JASPAR yes 30582668
chr1 89340170 89340180 NOTO JASPAR yes 30582669
chr1 89340170 89340180 RAX JASPAR yes 30582670
chr1 89340170 89340180 ALX3 JASPAR yes 118323886
chr1 89340170 89340180 EMX1 JASPAR yes 118323887
chr1 89340170 89340180 EMX2 JASPAR yes 118323888
chr1 89340170 89340180 ESX1 JASPAR yes 118323889
chr1 89340170 89340180 GBX2 JASPAR yes 118323890
chr1 89340170 89340180 GSX1 JASPAR yes 118323891
chr1 89340170 89340180 GSX2 JASPAR yes 118323892
chr1 89340170 89340180 HESX1 JASPAR yes 118323893
chr1 89340170 89340180 HOXB2 JASPAR yes 118323894
chr1 89340170 89340180 HOXB3 JASPAR yes 118323895
chr1 89340170 89340180 LBX2 JASPAR yes 118323896
chr1 89340170 89340180 LHX2 JASPAR yes 118323897
chr1 89340170 89340180 LHX6 JASPAR yes 118323898
chr1 89340170 89340180 MEOX1 JASPAR yes 118323899
chr1 89340170 89340180 MEOX2 JASPAR yes 118323900
chr1 89340170 89340180 MIXL1 JASPAR yes 118323901
chr1 89340170 89340180 MNX1 JASPAR yes 118323902
chr1 89340170 89340180 NOTO JASPAR yes 118323903
chr1 89340170 89340180 RAX JASPAR yes 118323904
chr1 89340171 89340179 BSX JASPAR yes 30582671
chr1 89340171 89340179 DLX6 JASPAR yes 30582672
chr1 89340171 89340179 EN1 JASPAR yes 30582673
chr1 89340171 89340179 ISX JASPAR yes 30582674
chr1 89340171 89340179 LBX1 JASPAR yes 30582675
chr1 89340171 89340179 LHX9 JASPAR yes 30582676
chr1 89340171 89340179 LMX1A JASPAR yes 30582677
chr1 89340171 89340179 LMX1B JASPAR yes 30582678
chr1 89340171 89340179 NKX6-1 JASPAR yes 30582679
chr1 89340171 89340179 NKX6-2 JASPAR yes 30582680
chr1 89340171 89340179 PAX4 JASPAR yes 30582681
chr1 89340171 89340179 PDX1 JASPAR yes 30582682
chr1 89340171 89340179 PRRX1 JASPAR yes 30582683
chr1 89340171 89340179 RAX2 JASPAR yes 30582684
chr1 89340171 89340179 SHOX JASPAR yes 30582685
chr1 89340171 89340179 UNCX JASPAR yes 30582686
chr1 89340171 89340179 VAX1 JASPAR yes 30582687
chr1 89340171 89340179 VAX2 JASPAR yes 30582688
chr1 89340171 89340179 VSX1 JASPAR yes 30582689
chr1 89340171 89340179 VSX2 JASPAR yes 30582690
chr1 89340171 89340179 BSX JASPAR yes 118323905
chr1 89340171 89340179 DLX6 JASPAR yes 118323906
chr1 89340171 89340179 EN1 JASPAR yes 118323907
chr1 89340171 89340179 ISX JASPAR yes 118323908
chr1 89340171 89340179 LBX1 JASPAR yes 118323909
chr1 89340171 89340179 LHX9 JASPAR yes 118323910
chr1 89340171 89340179 LMX1A JASPAR yes 118323911
chr1 89340171 89340179 LMX1B JASPAR yes 118323912
chr1 89340171 89340179 NKX6-1 JASPAR yes 118323913
chr1 89340171 89340179 NKX6-2 JASPAR yes 118323914
chr1 89340171 89340179 PAX4 JASPAR yes 118323915
chr1 89340171 89340179 PDX1 JASPAR yes 118323916
chr1 89340171 89340179 PRRX1 JASPAR yes 118323917
chr1 89340171 89340179 RAX2 JASPAR yes 118323918
chr1 89340171 89340179 SHOX JASPAR yes 118323919
chr1 89340171 89340179 UNCX JASPAR yes 118323920
chr1 89340171 89340179 VAX1 JASPAR yes 118323921
chr1 89340171 89340179 VAX2 JASPAR yes 118323922
chr1 89340171 89340179 VSX1 JASPAR yes 118323923
chr1 89340171 89340179 VSX2 JASPAR yes 118323924
chr1 89340171 89340181 HOXD13 JASPAR yes 30582691
chr1 89340171 89340181 HOXD13 JASPAR yes 118323925
chr1 89340171 89340184 DUXA JASPAR yes 30582692
chr1 89340171 89340184 DUXA JASPAR yes 118323926
chr1 89340172 89340183 DUX4 JASPAR yes 30582693
chr1 89340172 89340183 PHOX2A JASPAR yes 30582694
chr1 89340172 89340183 PROP1 JASPAR yes 30582695
chr1 89340172 89340183 DUX4 JASPAR yes 118323927
chr1 89340172 89340183 PHOX2A JASPAR yes 118323928
chr1 89340172 89340183 PROP1 JASPAR yes 118323929
chr1 89340174 89340195 IRF1 JASPAR yes 30582696
chr1 89340174 89340195 IRF1 JASPAR yes 118323930
chr1 89340175 89340196 IRF1 JASPAR yes 30582697
chr1 89340175 89340196 IRF1 JASPAR yes 118323931
Genes associated with rs541032590[chr1:89340176], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More