EnhancerDB
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  3. rs541041460[chr14:100540339]
Enhancers that have rs541041460[chr14:100540339]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr14 100521045 100540350 enh15937
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Epithelial (MCF-7) Blood (T-cell) Esophagus Astrocyte Liver Blood (OCI-LY7) Blood (GM12878) Muscle (A673) Placenta Peripheral Blood (MM.1S) Lung (PC-9) Thymus Heart
Transcript factors that have rs541041460[chr14:100540339]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr14 100537223 100542630 ZNF143 GTRD no Epithelial (MCF-7) 21638544
chr14 100537223 100542630 ZNF143 GTRD no Epithelial (MCF-7) 108123163
chr14 100537223 100542630 ZNF143 GTRD no Epithelial (MCF-7) 108123164
chr14 100539183 100540406 TCF7L2 GTRD no Colon (HCT116) 108123192
chr14 100539584 100543205 TCF7L2 GTRD no Colon (HCT116) 108123199
chr14 100540333 100540346 TFAP2A JASPAR yes 117756931
chr14 100540333 100540346 TFAP2B JASPAR yes 117756932
chr14 100540333 100540346 TFAP2C JASPAR yes 117756933
chr14 100540334 100540346 TFAP2A JASPAR yes 117756934
chr14 100540334 100540346 TFAP2B JASPAR yes 117756935
chr14 100540334 100540346 TFAP2C JASPAR yes 117756936
chr14 100540336 100540345 TFAP2A JASPAR yes 117756937
chr14 100540339 100540346 SP1 TRANSFAC yes 117756938
Genes associated with rs541041460[chr14:100540339], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More