EnhancerDB
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  3. rs541053842[chr2:225130017]
Enhancers that have rs541053842[chr2:225130017]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 225126465 225135575 enh34329
Prostate (PC-3) Liver (HepG2) Brain (SK-N-MC) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Lung (A549) Stomach Lung (PC-9) Epithelial (MCF-7)
Transcript factors that have rs541053842[chr2:225130017]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 225129997 225130018 IRF1 JASPAR yes 81323296
chr2 225129999 225130020 IRF1 JASPAR yes 81323299
chr2 225130001 225130022 IRF1 JASPAR yes 81323300
chr2 225130003 225130024 IRF1 JASPAR yes 81323301
chr2 225130007 225130028 IRF1 JASPAR yes 81323302
chr2 225130009 225130024 PRDM1 JASPAR yes 81323303
chr2 225130009 225130024 STAT2 JASPAR yes 81323304
chr2 225130010 225130024 SPIC JASPAR yes 81323305
chr2 225130010 225130024 STAT1 JASPAR yes 81323306
chr2 225130011 225130032 IRF1 JASPAR yes 81323307
chr2 225130012 225130027 FOXP1 JASPAR yes 81323308
chr2 225130012 225130033 IRF1 JASPAR yes 81323309
chr2 225130014 225130029 FOXP1 JASPAR yes 81323310
chr2 225130016 225130031 FOXP1 JASPAR yes 81323311
Genes associated with rs541053842[chr2:225130017], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More