EnhancerDB
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  3. rs541065599[chr17:47096997]
Enhancers that have rs541065599[chr17:47096997]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 47091445 47106595 enh17200
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-MC) Astrocyte Bone (Osteoblast) Muscle (A673) Placenta Colon (HCT116) Thyroid Embryonic Stem Cell Line (H1-hESC) Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs541065599[chr17:47096997]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 47096986 47096998 PKNOX2 JASPAR yes 54609346
chr17 47096986 47096998 TGIF1 JASPAR yes 54609347
chr17 47096996 47097000 YY1 TRANSFAC yes 54609348
chr17 47096997 47097007 HOXB13 JASPAR yes 54609349
Genes associated with rs541065599[chr17:47096997], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More