EnhancerDB
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  3. rs541074837[chr1:116876698]
Enhancers that have rs541074837[chr1:116876698]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 116846225 116879811 enh580
Bone Marrow (K562) Brain (SK-N-MC) Liver Blood (Karpas-422) Pancreas Blood (T-cell) Stomach Epithelial (MCF-7) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs541074837[chr1:116876698]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 116876479 116876701 ZNF274 GTRD no Liver (HepG2) 21332202
chr1 116876620 116877136 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21332203
chr1 116876637 116877033 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21332204
chr1 116876666 116877196 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21332205
chr1 116876669 116879957 ZNF274 GTRD no Blood (GM12878) 107823951
chr1 116876694 116876700 SOX10 JASPAR yes 31796366
chr1 116876695 116876715 TBX19 JASPAR yes 31796367
Genes associated with rs541074837[chr1:116876698], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More