EnhancerDB
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  3. rs541086282[chr17:62679401]
Enhancers that have rs541086282[chr17:62679401]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 62671385 62687563 enh17299
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Prostate (RWPE1) Astrocyte Bone (Osteoblast) Placenta Colon (HCT116) Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Epithelial (MCF-7)
Transcript factors that have rs541086282[chr17:62679401]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 62679248 62683082 ZNF143 GTRD no Epithelial (MCF-7) 21778916
chr17 62679284 62681253 TCF7L2 GTRD no Colon (HCT116) 21778917
chr17 62679301 62682615 ZNF143 GTRD no Epithelial (MCF-7) 21778918
chr17 62679385 62681238 TCF7L2 GTRD no Colon (HCT116) 21778919
chr17 62679396 62679411 FOXP1 JASPAR yes 55311049
chr17 62679398 62679413 FOXP1 JASPAR yes 55311050
chr17 62679401 62679416 FOXP1 JASPAR yes 55311051
Genes associated with rs541086282[chr17:62679401], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More