EnhancerDB
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  3. rs541096540[chr1:168375098]
Enhancers that have rs541096540[chr1:168375098]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 168352841 168381875 enh12353
Bone Marrow (K562) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Lung (A549) Placenta Colon (HCT116) Peripheral Blood (MM.1S) Lung (PC-9) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7)
Transcript factors that have rs541096540[chr1:168375098]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 168373782 168375487 ZNF274 GTRD no Bone Marrow (K562) 21347922
chr1 168373791 168375907 ZNF274 GTRD no Bone Marrow (K562) 21347925
chr1 168373900 168375130 ZNF274 GTRD no Bone Marrow (K562) 21347931
chr1 168373941 168376259 ZNF274 GTRD no Bone Marrow (K562) 21347935
chr1 168375010 168375286 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21347943
chr1 168375043 168375513 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21347944
chr1 168375056 168375360 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21347945
chr1 168375073 168375337 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21347946
chr1 168375077 168375407 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21347947
chr1 168375085 168375106 IRF1 JASPAR yes 32923000
chr1 168375089 168375104 PRDM1 JASPAR yes 32923001
chr1 168375089 168375110 ZNF263 JASPAR yes 32923002
chr1 168375091 168375112 IRF1 JASPAR yes 32923003
chr1 168375092 168375113 ZNF263 JASPAR yes 32923004
chr1 168375094 168375108 IRF7 JASPAR yes 32923005
chr1 168375094 168375108 IRF8 JASPAR yes 32923006
chr1 168375095 168375110 PRDM1 JASPAR yes 32923007
chr1 168375097 168375118 IRF1 JASPAR yes 32923008
Genes associated with rs541096540[chr1:168375098], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More