EnhancerDB
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Enhancers that have rs541130486[chr1:205505269]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 205502445 205516735 enh12593
Prostate (PC-3) Cervix (HeLa-S3) Epithelial (MCF-7) Large Intestine Prostate (RWPE1) Astrocyte Lung Stomach Placenta Lung (PC-9) Pancreas Heart
Transcript factors that have rs541130486[chr1:205505269]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 205502585 205505617 ZNF143 GTRD no Epithelial (MCF-7) 21372014
chr1 205503122 205505643 ZNF143 GTRD no Epithelial (MCF-7) 21372015
chr1 205503307 205506463 ZNF143 GTRD no Epithelial (MCF-7) 21372016
chr1 205503398 205505461 ZNF143 GTRD no Epithelial (MCF-7) 21372017
chr1 205503408 205506432 ZNF143 GTRD no Epithelial (MCF-7) 21372018
chr1 205503765 205506045 ZNF143 GTRD no Epithelial (MCF-7) 21372019
chr1 205503792 205506453 ZNF274 GTRD no Cervix (HeLa-S3) 21372020
chr1 205503855 205505568 ZNF143 GTRD no Epithelial (MCF-7) 21372021
chr1 205503881 205507307 ZNF274 GTRD no Cervix (HeLa-S3) 21372022
chr1 205503991 205506056 ZNF143 GTRD no Epithelial (MCF-7) 21372023
chr1 205504005 205506720 ZNF143 GTRD no Epithelial (MCF-7) 21372024
chr1 205504051 205505418 ZNF143 GTRD no Epithelial (MCF-7) 21372025
chr1 205504071 205506567 ZNF143 GTRD no Epithelial (MCF-7) 21372026
chr1 205504077 205506404 ZNF274 GTRD no Cervix (HeLa-S3) 21372027
chr1 205504091 205507176 ZNF143 GTRD no Epithelial (MCF-7) 21372028
chr1 205504094 205506044 ZNF143 GTRD no Epithelial (MCF-7) 21372029
chr1 205504094 205506553 ZNF143 GTRD no Epithelial (MCF-7) 21372030
chr1 205504129 205506204 ZNF143 GTRD no Epithelial (MCF-7) 21372031
chr1 205504144 205505301 ZNF143 GTRD no Epithelial (MCF-7) 21372032
chr1 205504180 205506013 ZNF274 GTRD no Cervix (HeLa-S3) 21372034
chr1 205504284 205505392 ZNF143 GTRD no Epithelial (MCF-7) 21372035
chr1 205504290 205506700 ZNF143 GTRD no Epithelial (MCF-7) 21372036
chr1 205504519 205506229 ZNF143 GTRD no Epithelial (MCF-7) 21372038
chr1 205504544 205505328 ZNF274 GTRD no Cervix (HeLa-S3) 21372039
chr1 205504550 205506566 ZNF143 GTRD no Epithelial (MCF-7) 21372040
chr1 205504565 205505279 ZNF143 GTRD no Epithelial (MCF-7) 21372041
chr1 205504649 205505619 ZNF274 GTRD no Cervix (HeLa-S3) 21372042
chr1 205504823 205505739 ZNF274 GTRD no Cervix (HeLa-S3) 21372044
chr1 205504890 205505531 ZNF274 GTRD no Cervix (HeLa-S3) 21372047
chr1 205504914 205505532 ZNF143 GTRD no Epithelial (MCF-7) 21372048
chr1 205505261 205505272 DMRT3 JASPAR yes 34768153
chr1 205505265 205505270 GATA2 JASPAR yes 34768154
Genes associated with rs541130486[chr1:205505269], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More