EnhancerDB
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  3. rs541138350[chr1:42369575]
Enhancers that have rs541138350[chr1:42369575]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 42354446 42370305 enh11796
Prostate (PC-3) Cervix (HeLa-S3) Epithelial (MCF-7) Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Blood (T-cell) Astrocyte Bone (Osteoblast) Stomach Placenta Colon (HCT116) Peripheral Blood (MM.1S) Muscle (Myoblast) Pancreas Spleen Muscle (Myotube) Thymus Heart
Transcript factors that have rs541138350[chr1:42369575]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 42369554 42369575 IRF1 JASPAR yes 28436194
chr1 42369559 42369580 IRF1 JASPAR yes 28436198
chr1 42369563 42369584 IRF1 JASPAR yes 28436200
chr1 42369564 42369579 FOXP1 JASPAR yes 28436201
chr1 42369564 42369585 IRF1 JASPAR yes 28436202
chr1 42369565 42369580 FOXP1 JASPAR yes 28436203
chr1 42369565 42369586 IRF1 JASPAR yes 28436204
chr1 42369569 42369590 IRF1 JASPAR yes 28436205
chr1 42369570 42369585 FOXP1 JASPAR yes 28436206
chr1 42369570 42369591 IRF1 JASPAR yes 28436207
chr1 42369572 42369587 FOXP1 JASPAR yes 28436208
chr1 42369574 42369589 FOXP1 JASPAR yes 28436209
chr1 42369575 42369590 FOXP1 JASPAR yes 28436210
Genes associated with rs541138350[chr1:42369575], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More