EnhancerDB
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  3. rs541152394[chr1:110176655]
Enhancers that have rs541152394[chr1:110176655]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 110173365 110188215 enh61883
Cervix (HeLa-S3) Brain (SK-N-SH) Esophagus Muscle (A673) Colon (HCT116) Peripheral Blood (MM.1S) Lung (PC-9) Breast Uterus Blood (T-cell)
Transcript factors that have rs541152394[chr1:110176655]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 110175688 110176925 ZBTB33 GTRD no Brain (SK-N-SH) 21327012
chr1 110176104 110176846 ZBTB33 GTRD no Brain (SK-N-SH) 21327013
chr1 110176175 110176778 TCF7L2 GTRD no Colon (HCT116) 21327014
chr1 110176211 110176869 TCF7L2 GTRD no Colon (HCT116) 21327015
chr1 110176214 110176869 ZBTB33 GTRD no Brain (SK-N-SH) 21327016
chr1 110176238 110176856 ZBTB33 GTRD no Brain (SK-N-SH) 21327017
chr1 110176249 110176703 TCF7L2 GTRD no Colon (HCT116) 21327018
chr1 110176290 110176959 ZBTB33 GTRD no Brain (SK-N-SH) 21327020
chr1 110176652 110176662 HOXA13 JASPAR yes 31431097
chr1 110176652 110176662 HOXB13 JASPAR yes 31431098
chr1 110176652 110176662 HOXD13 JASPAR yes 31431099
chr1 110176652 110176663 HOXA10 JASPAR yes 31431100
chr1 110176653 110176662 CDX1 JASPAR yes 31431101
chr1 110176653 110176664 CDX2 JASPAR yes 31431102
chr1 110176654 110176666 MEF2A JASPAR yes 31431103
chr1 110176654 110176666 MEF2B JASPAR yes 31431104
chr1 110176654 110176666 MEF2D JASPAR yes 31431105
Genes associated with rs541152394[chr1:110176655], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More