EnhancerDB
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  3. rs541290200[chr1:46343650]
Enhancers that have rs541290200[chr1:46343650]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 46325665 46343935 enh326
Prostate (PC-3) Liver (HepG2) Large Intestine Astrocyte Blood (OCI-LY7) Lung (A549) Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Pancreas (Panc1) Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs541290200[chr1:46343650]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 46343646 46343659 NFKB1 JASPAR yes 28624988
chr1 46343648 46343654 ZNF354C JASPAR yes 28624989
Genes associated with rs541290200[chr1:46343650], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More