EnhancerDB
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  3. rs541556205[chr6:42326534]
Enhancers that have rs541556205[chr6:42326534]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 42316725 42330135 enh9114
Skin (Keratinocyte) Prostate (PC-3) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Peripheral Blood (MM.1S) Blood (Karpas-422) Pancreas (Panc1) Blood (T-cell)
Transcript factors that have rs541556205[chr6:42326534]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 42326515 42326536 IRF1 JASPAR yes 101712277
chr6 42326518 42326539 IRF1 JASPAR yes 101712278
chr6 42326519 42326540 IRF1 JASPAR yes 101712279
chr6 42326520 42326535 FOXP1 JASPAR yes 101712280
chr6 42326520 42326541 IRF1 JASPAR yes 101712281
chr6 42326521 42326536 FOXP1 JASPAR yes 101712282
chr6 42326521 42326542 IRF1 JASPAR yes 101712283
chr6 42326522 42326537 FOXP1 JASPAR yes 101712284
chr6 42326522 42326543 IRF1 JASPAR yes 101712285
chr6 42326523 42326538 FOXP1 JASPAR yes 101712286
chr6 42326523 42326544 IRF1 JASPAR yes 101712287
chr6 42326524 42326539 FOXP1 JASPAR yes 101712288
chr6 42326524 42326545 IRF1 JASPAR yes 101712289
chr6 42326524 42326545 ZNF263 JASPAR yes 101712290
chr6 42326525 42326540 FOXP1 JASPAR yes 101712291
chr6 42326526 42326541 FOXP1 JASPAR yes 101712292
chr6 42326526 42326547 IRF1 JASPAR yes 101712293
chr6 42326527 42326542 FOXP1 JASPAR yes 101712294
chr6 42326528 42326543 FOXP1 JASPAR yes 101712295
chr6 42326529 42326544 FOXP1 JASPAR yes 101712296
Genes associated with rs541556205[chr6:42326534], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More