EnhancerDB
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  3. rs541561462[chr6:42349112]
Enhancers that have rs541561462[chr6:42349112]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 42330865 42350575 enh9115
Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Blood (T-cell) Blood (OCI-LY7) Blood (GM12878) Stomach Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Pancreas Thymus Heart
Transcript factors that have rs541561462[chr6:42349112]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 42349107 42349112 NFY TRANSFAC yes 101715396
chr6 42349110 42349122 ZBTB7B JASPAR yes 101715397
chr6 42349110 42349122 ZBTB7C JASPAR yes 101715398
chr6 42349112 42349126 GLIS3 JASPAR yes 101715399
Genes associated with rs541561462[chr6:42349112], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More