EnhancerDB
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  3. rs541580406[chr19:3518122]
Enhancers that have rs541580406[chr19:3518122]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 3503817 3522715 enh4965
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Brain (SK-N-SH) Prostate (RWPE1) Blood (T-cell) Astrocyte Bone (Osteoblast) Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Thymus Epithelial (MCF-7)
Transcript factors that have rs541580406[chr19:3518122]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 3517583 3521643 ZNF274 GTRD no Cervix (HeLa-S3) 108367415
chr19 3517583 3521643 ZNF274 GTRD no Cervix (HeLa-S3) 108367416
chr19 3518111 3518124 NFKB1 JASPAR yes 112137061
chr19 3518112 3518123 FOS JASPAR yes 112137062
chr19 3518112 3518123 JUND JASPAR yes 112137063
chr19 3518116 3518125 ZEB1 JASPAR yes 112137064
chr19 3518119 3518124 USF2 TRANSFAC yes 112137065
Genes associated with rs541580406[chr19:3518122], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More