EnhancerDB
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  3. rs541584318[chr1:172292050]
Enhancers that have rs541584318[chr1:172292050]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 172287865 172297555 enh74414
Prostate (PC-3) Prostate (RWPE1) Muscle (A673) Uterus Epithelial (MCF-7)
Transcript factors that have rs541584318[chr1:172292050]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 172291341 172292053 POLR2A UCSC Txn Factor no Conserved 107845531
chr1 172291400 172292160 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107845535
chr1 172291400 172292216 EP300 UCSC Txn Factor no Conserved 107845536
chr1 172291407 172292097 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107845537
chr1 172291407 172292104 TCF12 UCSC Txn Factor no Conserved 107845538
chr1 172291407 172292104 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107845539
chr1 172291449 172292053 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107845541
chr1 172291483 172292059 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107845547
chr1 172291628 172292224 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 107845560
chr1 172291704 172292114 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107845562
chr1 172291790 172292166 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107845563
chr1 172291825 172292221 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107845564
chr1 172291826 172292196 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107845565
chr1 172291865 172292269 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107845566
chr1 172291883 172292139 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107845567
chr1 172291886 172292216 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107845568
chr1 172292043 172292052 NFIX JASPAR yes 33122585
chr1 172292044 172292050 NFIC JASPAR yes 33122586
Genes associated with rs541584318[chr1:172292050], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More