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- rs541597724[chr12:53289070]
Enhancers that have rs541597724[chr12:53289070]
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| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr12 |
53287185 |
53291335 |
enh109553 |
|
|
| chr12 |
53288883 |
53289427 |
vista13498 |
|
|
Transcript factors that have rs541597724[chr12:53289070]
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| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr12
|
53287920
|
53289492
|
AR
|
GTRD
|
no
|
Prostate (PC-3)
|
108034877
|
|
|
chr12
|
53288791
|
53289799
|
ZBTB33
|
GTRD
|
no
|
Brain (SK-N-SH)
|
108034878
|
|
|
chr12
|
53288866
|
53289522
|
ZNF217
|
ENCODE Uniform TFBS
|
no
|
Epithelial (MCF-7)
|
108034879
|
|
|
chr12
|
53288890
|
53289386
|
ZNF217
|
ENCODE Uniform TFBS
|
no
|
Epithelial (MCF-7)
|
108034880
|
|
|
chr12
|
53288919
|
53289621
|
GATA3
|
UCSC Txn Factor
|
no
|
Conserved
|
108034881
|
|
|
chr12
|
53288952
|
53289522
|
ZNF217
|
ENCODE Uniform TFBS
|
no
|
Epithelial (MCF-7)
|
108034882
|
|
|
chr12
|
53288965
|
53289505
|
ZBTB33
|
ENCODE Uniform TFBS
|
no
|
Lung (A549)
|
108034883
|
|
|
chr12
|
53288969
|
53289623
|
ZNF274
|
GTRD
|
no
|
Blood (GM12878)
|
108034884
|
|
|
chr12
|
53288987
|
53289491
|
ZBTB33
|
ENCODE Uniform TFBS
|
no
|
Lung (A549)
|
108034885
|
|
|
chr12
|
53288996
|
53289532
|
ZBTB33
|
ENCODE Uniform TFBS
|
no
|
Lung (A549)
|
108034886
|
|
|
chr12
|
53288997
|
53289433
|
ZBTB33
|
ENCODE Uniform TFBS
|
no
|
Lung (A549)
|
108034887
|
|
|
chr12
|
53288998
|
53290427
|
ZBTB33
|
ENCODE Uniform TFBS
|
no
|
Lung (A549)
|
108034888
|
|
|
chr12
|
53288998
|
53291673
|
POLR2A
|
UCSC Txn Factor
|
no
|
Conserved
|
108034889
|
|
|
chr12
|
53289010
|
53289626
|
ZNF274
|
ENCODE Uniform TFBS
|
no
|
Liver (HepG2)
|
108034890
|
|
|
chr12
|
53289012
|
53289559
|
TCF12
|
UCSC Txn Factor
|
no
|
Conserved
|
108034891
|
|
|
chr12
|
53289012
|
53289559
|
ZBTB33
|
ENCODE Uniform TFBS
|
no
|
Lung (A549)
|
108034892
|
|
|
chr12
|
53289033
|
53289349
|
ZNF274
|
ENCODE Uniform TFBS
|
no
|
Liver (HepG2)
|
108034893
|
|
|
chr12
|
53289040
|
53289525
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Cervix (HeLa-S3)
|
108034894
|
|
|
chr12
|
53289041
|
53289517
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Cervix (HeLa-S3)
|
108034895
|
|
|
chr12
|
53289044
|
53289564
|
ZBTB33
|
ENCODE Uniform TFBS
|
no
|
Lung (A549)
|
108034896
|
|
|
chr12
|
53289044
|
53289691
|
ZBTB33
|
GTRD
|
no
|
Lung (A549)
|
108034897
|
|
|
chr12
|
53289047
|
53289593
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108034898
|
|
|
chr12
|
53289048
|
53289552
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Cervix (HeLa-S3)
|
108034899
|
|
|
chr12
|
53289049
|
53289433
|
ZNF217
|
ENCODE Uniform TFBS
|
no
|
Epithelial (MCF-7)
|
108034900
|
|
|
chr12
|
53289060
|
53289456
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Cervix (HeLa-S3)
|
108034901
|
|
|
chr12
|
53289063
|
53289439
|
ZNF274
|
ENCODE Uniform TFBS
|
no
|
Liver (HepG2)
|
108034902
|
|
|
chr12
|
53289065
|
53289245
|
ZNF217
|
ENCODE Uniform TFBS
|
no
|
Epithelial (MCF-7)
|
108034903
|
|
|
chr12
|
53289066
|
53289450
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Cervix (HeLa-S3)
|
108034904
|
|
|
chr12
|
53289069
|
53289378
|
TFAP2C
|
UCSC Txn Factor
|
no
|
Conserved
|
108034905
|
|
|
chr12
|
53289069
|
53289378
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Cervix (HeLa-S3)
|
108034906
|
|
Genes associated with rs541597724[chr12:53289070], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |